What do the colours on the pathway heatmaps represent? - FastBMD
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The pathway heatmap is an appealing visualization to clearly shows how the expression of each pathway gene compares to the others. It is generated when you click a pathway or gene set name in the “Gene Set Enrichment” panel at the result page. An example output is shown below The pathway heatmap values are calculated through a series of steps: The fitted model for each gene is evaluated across the range of doses in the uploaded data. The resulting modeled expression values are normalized
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Visualization - Heatmap - Heatmap - Q
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Help Online - Tutorials - Create Heatmap with Virtual Matrix and
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Forests, Free Full-Text
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How to Draw Heatmap with Colorful Dendrogram
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Dose-response metabolomics and pathway sensitivity to map
![](https://www.researchgate.net/publication/290432745/figure/fig3/AS:341350840061961@1458395790769/Heat-map-of-changes-in-whole-body-plasma-and-hepatic-features-associated-with-the-NP.png)
Heat map of changes in whole body, plasma and hepatic features
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Help Online - Tutorials - Create Heatmap with Virtual Matrix and
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graph - What is the algorithm to create colors for a heatmap
![](https://www.researchgate.net/publication/333704841/figure/fig5/AS:768807740129280@1560309457046/Heat-map-visualization-for-functional-pathways-of-16-samples-The-heat-map-was-generated.png)
Heat-map visualization for functional pathways of 16 samples. The
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Superheat Vignette